STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24082.1DNA-binding helix-turn-helix protein; KEGG: cja:CJA_3717 0.0047 dam; adenine-specific DNA methyltransferase; Psort location: Cytoplasmic, score: 7.50. (137 aa)    
Predicted Functional Partners:
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.794
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.776
EFW24671.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
   
 0.583
EFW23479.1
Putative D-tyrosyl-tRNA(Tyr) deacylase; Belongs to the MurCDEF family. MurE subfamily.
 
  
  0.478
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
       0.459
EFW23635.1
Polysaccharide biosynthesis protein; KEGG: lsl:LSL_0995 2.3e-159 UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase K00100:K01726; Psort location: CytoplasmicMembrane, score: 9.55.
  
 
 0.424
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.415
EFW24642.1
KEGG: lsl:LSL_1329 2.3e-104 pyridine nucleotide-disulphide oxidoreductase family protein K00540; Psort location: Cytoplasmic, score: 9.97.
    
 0.411
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
    
 0.411
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
 
  0.407
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.