STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24086.1Cation diffusion facilitator family transporter; KEGG: msi:Msm_0789 2.1e-39 cation efflux system protein (zinc/cadmium/cobalt); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (391 aa)    
Predicted Functional Partners:
EFW24084.1
Putative membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.785
EFW24085.1
Ser/Thr phosphatase family protein; KEGG: bcl:ABC2957 3.7e-42 5'-nucleotidase K01081; Psort location: Cellwall, score: 8.97; Belongs to the 5'-nucleotidase family.
       0.773
EFW24087.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.705
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
    0.610
EFW24433.1
Copper-exporting ATPase; KEGG: ere:EUBREC_0615 5.1e-267 heavy-metal transporting P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.549
cobB
Transcriptional regulator, Sir2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
       0.520
EFW24088.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.508
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.