STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntPHypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. (195 aa)    
Predicted Functional Partners:
EFW23988.1
Metal cation transporter, ZIP family; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.912
EFW24093.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
       0.773
EFW24094.1
Alpha amylase, catalytic domain protein; KEGG: cbt:CLH_2152 4.2e-137 alpha-amylase K01176; Psort location: Extracellular, score: 9.60.
  
    0.566
EFW24095.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.548
EFW24091.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.487
EFW24090.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.486
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.