STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW23634.1Chain length determinant protein; KEGG: rxy:Rxyl_0560 3.6e-09 protein-tyrosine kinase K08252; Psort location: Cytoplasmic, score: 7.50. (219 aa)    
Predicted Functional Partners:
EFW23930.1
Nucleotide-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.912
EFW23635.1
Polysaccharide biosynthesis protein; KEGG: lsl:LSL_0995 2.3e-159 UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase K00100:K01726; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.886
EFW23636.1
Bacterial sugar transferase; KEGG: fta:FTA_0627 1.6e-64 glycosyltransferase; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.861
EFW23632.1
Cell envelope-like function transcriptional attenuator common domain protein; KEGG: bbe:BBR47_18860 0.0013 putative N-acetylmuramoyl-L-alanine amidase K01448; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.769
EFW23633.1
NAD dependent epimerase/dehydratase family protein; KEGG: bha:BH3715 2.1e-62 UDP-glucose 4-epimerase (galactowaldenases); K01784 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.754
EFW23640.1
Polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 2.4e-10 cytosol aminopeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.728
prkC
Serine/threonine-protein kinase PrkC; KEGG: ssa:SSA_1845 1.5e-95 pkn; serine/threonine protein kinase, putative K08884; Psort location: CytoplasmicMembrane, score: 9.96.
   
 
 0.694
EFW23637.1
Glycosyltransferase, group 1 family protein; KEGG: gbe:GbCGDNIH1_1752 2.4e-31 alpha-L-glycero-D-manno-heptose alpha-1,3-glucosyltransferase K00754; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.683
EFW23642.1
KEGG: spd:SPD_1200 1.1e-24 glycosyl transferase, group 1 family protein K00754; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.666
EFW23638.1
Glycosyltransferase, group 2 family protein; KEGG: cbi:CLJ_B2936 1.7e-28 putative glycosyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.661
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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