STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW23684.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (278 aa)    
Predicted Functional Partners:
EFW23685.1
CBS domain protein; KEGG: azo:azo1748 1.6e-05 hypothetical protein; K00088 IMP dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.890
thrC
Threonine synthase.
  
 0.603
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
   
 0.588
EFW24506.1
DNA-binding helix-turn-helix protein; KEGG: mcc:718564 0.0018 PTPRB; protein tyrosine phosphatase, receptor type, B; K05694 protein tyrosine phosphatase, receptor type, B; Psort location: Cytoplasmic, score: 7.50.
 
     0.581
EFW24060.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: san:gbs0053 0. bifunctional acetaldehyde-CoA/alcohol dehydrogenase; K00001 alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.580
EFW23527.1
Homoserine dehydrogenase.
  
 
 0.571
EFW23683.1
Putative dipeptidase; KEGG: tte:TTE1746 4.6e-83 argE2; dipeptidase PepV; K01439 succinyl-diaminopimelate desuccinylase; Psort location: Cytoplasmic, score: 7.50.
     
 0.568
EFW24933.1
Cys/Met metabolism PLP-dependent enzyme; KEGG: spb:M28_Spy0144 4.0e-148 metB; cystathionine beta-lyase K01760; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.550
EFW23864.1
Putative L-serine ammonia-lyase; KEGG: fnu:FN1106 2.8e-83 L-serine dehydratase K01752; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.545
EFW24228.1
KEGG: ote:Oter_2427 5.3e-59 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97.
    
 0.542
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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