STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW23707.1ABC transporter, permease protein; KEGG: xfn:XfasM23_1548 5.1e-29 monosaccharide-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00. (292 aa)    
Predicted Functional Partners:
EFW23705.1
ABC transporter, solute-binding protein.
 
 0.999
EFW23706.1
ABC transporter, permease protein; KEGG: cpy:Cphy_1880 4.7e-122 fructose-bisphosphate aldolase K10109; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
EFW24047.1
ABC transporter, permease protein; KEGG: sis:LS215_1162 3.5e-23 binding-protein-dependent transport systems inner membrane component K10109; Psort location: CytoplasmicMembrane, score: 10.00.
 0.997
EFW23704.1
ABC transporter, ATP-binding protein; KEGG: bcr:BCAH187_A2099 4.9e-88 sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112; Psort location: CytoplasmicMembrane, score: 9.96; Belongs to the ABC transporter superfamily.
 
 0.997
EFW24044.1
ABC transporter, ATP-binding protein; KEGG: bcr:BCAH187_A2099 5.4e-121 sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112; Psort location: CytoplasmicMembrane, score: 9.96; Belongs to the ABC transporter superfamily.
 
 0.996
EFW25359.1
PTS system, glucose-like IIB component; KEGG: cbe:Cbei_0751 2.9e-232 PTS system, glucose subfamily, IIA subunit; K02763 PTS system, D-glucosamine-specific IIA component; K02764 PTS system, D-glucosamine-specific IIB component K02765; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.821
ptbA
KEGG: stc:str0192 1.3e-30 PTS glucose-specific enzyme IIABC components, truncated; K02777 PTS system, glucose-specific IIA component; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.821
EFW23484.1
PTS system, glucose-like IIB component.
  
 
 0.821
EFW23498.1
Phosphotransferase system, EIIB.
  
 
 0.821
EFW24286.1
Cyclomaltodextrinase; KEGG: bce:BC4014 6.2e-104 neopullulanase K01234; Psort location: Cytoplasmic, score: 9.97; Belongs to the glycosyl hydrolase 13 family.
  
 0.807
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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