STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srtBSortase, SrtB family; Psort location: Extracellular, score: 9.22. (263 aa)    
Predicted Functional Partners:
EFW23581.1
Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.775
EFW25071.1
Cna protein B-type domain protein.
 
 
   0.747
EFW23582.1
Bacterial transferase hexapeptide repeat protein; KEGG: cta:CTA_0682 2.5e-27 glmU; glucosamine-1-phosphate acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.707
EFW25436.1
Cna protein B-type domain protein; KEGG: mmw:Mmwyl1_1672 0.0057 beta strand repeat-containing protein.
 
 
   0.641
EFW25301.1
Periplasmic binding protein; KEGG: ani:AN0252.2 0.0047 hypothetical protein; K02136 F-type H+-transporting ATPase subunit gamma.
  
  
 0.640
EFW23579.1
Putative holo-[acyl-carrier-protein] synthase; KEGG: kol:Kole_1853 2.6e-11 holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase; Psort location: Cytoplasmic, score: 7.50; Belongs to the P-Pant transferase superfamily.
       0.550
EFW24984.1
Cna protein B-type domain protein; KEGG: chu:CHU_1335 0.0016 endoglucanase-like protein K01238; Psort location: Cellwall, score: 8.97.
 
 
   0.540
EFW23444.1
LPXTG-motif cell wall anchor domain protein.
 
 
   0.539
EFW24887.1
Efflux ABC transporter, permease protein; KEGG: dme:Dmel_CG3322 2.6e-08 LanB2; Laminin B2 K05635; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.470
EFW23983.1
Collagen binding domain protein; KEGG: chu:CHU_0841 0.0089 hypothetical protein K01238; Psort location: Cellwall, score: 9.07.
 
 
   0.470
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.