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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asdAspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. (328 aa)    
Predicted Functional Partners:
EFW23527.1
Homoserine dehydrogenase.
 
 0.999
EFW23528.1
Amino acid kinase family; Belongs to the aspartokinase family.
 
 
 0.999
pgk
KEGG: lba:Lebu_0298 8.6e-130 phosphoglycerate kinase K00927; Psort location: Cytoplasmic, score: 9.97.
  
 0.931
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.899
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
 
  
 0.898
thrC
Threonine synthase.
  
 
 0.873
EFW23524.1
ACT domain protein; Belongs to the UPF0735 family.
 
  
  0.828
EFW23575.1
Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein; KEGG: eel:EUBELI_00115 1.9e-70 diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.796
gap
KEGG: cbk:CLL_A3066 2.2e-138 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134; Psort location: Cytoplasmic, score: 9.97.
  
 0.766
EFW24060.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: san:gbs0053 0. bifunctional acetaldehyde-CoA/alcohol dehydrogenase; K00001 alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.716
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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