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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFQ04609.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (88 aa)    
Predicted Functional Partners:
EFQ04610.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFQ04611.1
DnaD domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFQ04608.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.737
EFQ04607.1
Hypothetical protein.
       0.600
EFQ04612.1
Recombination and repair protein RecT domain protein; KEGG: rno:682370 0.0074 similar to DNA-directed RNA polymerase III 32 kDa polypeptide (RNA polymerase III C32 subunit); K03024 DNA-directed RNA polymerase III subunit C31.
       0.592
EFQ04605.1
Hypothetical protein.
       0.461
EFQ04606.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.461
EFQ04604.1
KEGG: shn:Shewana3_3590 3.6e-09 single-strand binding protein K03111.
       0.456
Your Current Organism:
Megasphaera micronuciformis
NCBI taxonomy Id: 706434
Other names: M. micronuciformis F0359, Megasphaera micronuciformis F0359, Megasphaera micronuciformis str. F0359, Megasphaera micronuciformis strain F0359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.