STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFQ04283.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (322 aa)    
Predicted Functional Partners:
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.752
EFQ04284.1
Putative DNA modification/repair radical SAM protein; Psort location: Cytoplasmic, score: 8.96.
       0.623
EFQ04285.1
Putative DNA metabolism protein; KEGG: fba:FIC_02204 2.8e-21 uracil-DNA glycosylase.
       0.614
nifJ
KEGG: cby:CLM_3126 0. pyruvate ferredoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.529
nifJ-2
KEGG: tex:Teth514_0384 0. pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K03737 putative pyruvate-flavodoxin oxidoreductase.
     
 0.509
nifJ-3
KEGG: cbi:CLJ_B2987 0. pyruvate ferredoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
     
 0.509
argS
arginine--tRNA ligase; KEGG: chy:CHY_0124 1.0e-151 argS; arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 9.97.
  
    0.459
EFQ04286.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.438
EFQ04297.1
Transcriptional regulator, AsnC family; KEGG: hiq:CGSHiGG_06305 5.8e-05 carbamate kinase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.437
EFQ04282.1
ADP-ribosylglycohydrolase; KEGG: azo:azo2644 1.3e-41 draG2; putative ADP-ribosyl-[dinitrogen reductase] hydrolase.
       0.427
Your Current Organism:
Megasphaera micronuciformis
NCBI taxonomy Id: 706434
Other names: M. micronuciformis F0359, Megasphaera micronuciformis F0359, Megasphaera micronuciformis str. F0359, Megasphaera micronuciformis strain F0359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.