Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFQ03851.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (134 aa)    
Predicted Functional Partners:
EFQ03852.1
Hypothetical protein; KEGG: lsa:LSA0762 1.2e-18 extracellular/cell surface DNA-entry nuclease precursor K01173.
 
     0.954
EFQ03850.1
KEGG: npu:Npun_R2916 9.6e-08 pentapeptide repeat-containing serine/threonine kinase; K08884 serine/threonine protein kinase, bacterial.
       0.769
EFQ03849.1
KEGG: fnu:FN2073 8.7e-50 adenine phosphoribosyltransferase K00759; Psort location: Cytoplasmic, score: 8.96.
       0.696
EFQ03853.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.671
EFQ03848.1
Hypothetical protein.
       0.616
EFQ04829.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.615
EFQ03995.1
Hypothetical protein.
  
     0.474
EFQ04994.1
Hep/Hag repeat protein; KEGG: eci:UTI89_C4143 2.6e-11 putative autotransport adhesin; Psort location: Extracellular, score: 9.65.
  
     0.455
EFQ03847.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.434
Your Current Organism:
Megasphaera micronuciformis
NCBI taxonomy Id: 706434
Other names: M. micronuciformis F0359, Megasphaera micronuciformis F0359, Megasphaera micronuciformis str. F0359, Megasphaera micronuciformis strain F0359
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