STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFQ03484.1KEGG: cby:CLM_0322 7.1e-16 antioxidant, AhpC/TSA family. (180 aa)    
Predicted Functional Partners:
EFQ03483.1
4Fe-4S binding domain protein; KEGG: cco:CCC13826_1973 5.2e-13 riboflavin biosynthesis protein ribAB; Psort location: CytoplasmicMembrane, score: 10.00.
       0.782
EFQ03482.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
       0.773
EFQ03683.1
KEGG: cbk:CLL_A2853 3.4e-190 5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 8.96.
    
  0.602
EFQ03481.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: amu:Amuc_1800 1.6e-59 2,5-didehydrogluconate reductase; Psort location: Cytoplasmic, score: 9.97.
  
    0.525
EFQ03480.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.485
EFQ03485.1
Nitrite/sulfite reductase ferredoxin domain protein; KEGG: cbt:CLH_0860 4.6e-92 ferredoxin-nitrite reductase; K00366 ferredoxin-nitrite reductase; Psort location: Cytoplasmic, score: 8.96; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
       0.479
mtnP
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.
  
  
  0.417
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.409
Your Current Organism:
Megasphaera micronuciformis
NCBI taxonomy Id: 706434
Other names: M. micronuciformis F0359, Megasphaera micronuciformis F0359, Megasphaera micronuciformis str. F0359, Megasphaera micronuciformis strain F0359
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