STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHE69143.1hydroxymethylglutaryl-CoA reductase, degradative; KEGG: ccm:Ccan_23530 1.1e-156 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054; Psort location: Cytoplasmic, score: 8.96; Belongs to the HMG-CoA reductase family. (433 aa)    
Predicted Functional Partners:
KHE69324.1
KEGG: coc:Coch_0622 2.3e-145 protein containing mevalonate and galactokinase signatures; K00869 mevalonate kinase; Psort location: Cytoplasmic, score: 8.96.
 
 0.988
KHE70667.1
KEGG: coc:Coch_0497 1.3e-149 GHMP kinase; K01597 diphosphomevalonate decarboxylase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.889
KHE68783.1
Hypothetical protein.
 
 0.873
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
 
 0.813
KHE69145.1
Hypothetical protein.
       0.773
KHE69144.1
Hypothetical protein.
       0.572
KHE68141.1
Hypothetical protein; KEGG: mja:MJ_1448 0.0038 type II R/M system modification methyltransferase; K00590 site-specific DNA-methyltransferase (cytosine-N4-specific); Psort location: Cytoplasmic, score: 8.96.
    
 
 0.530
KHE68271.1
Heptaprenyl diphosphate synthase component 2 family protein; KEGG: coc:Coch_1844 3.5e-103 polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.502
KHE67962.1
Hypothetical protein; KEGG: coc:Coch_2084 1.6e-80 polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.502
KHE70610.1
Chloride transporter, ClC family; KEGG: apb:SAR116_0838 3.6e-27 Cl-channel voltage-gated family protein K03281; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.486
Your Current Organism:
Capnocytophaga sp. F0087
NCBI taxonomy Id: 706436
Other names: C. sp. oral taxon 329 str. F0087, Capnocytophaga sp. oral taxon 329 str. F0087, Capnocytophaga sp. oral taxon 329 strain F0087
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