STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO65405.1Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. (147 aa)    
Predicted Functional Partners:
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.998
KHO65407.1
Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
flgG
Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
flgG-2
Makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
KHO65406.1
Flagellar basal body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.997
flgF
Flagellar basal body rod protein FlgF; FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
KHO66152.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.996
KHO64826.1
Flagellar basal body rod protein FlgF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
KHO63897.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.996
flgE
The hook connects flagellar basal body to the flagellar filament; Vibrio parahaemolyticus protein is associated with the lateral flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
Your Current Organism:
Pseudomonas flexibilis
NCBI taxonomy Id: 706570
Other names: ATCC 29606, JCM 14085 [[Pseudomonas tuomuerensis]], LMG 29034, LMG:29034, P. flexibilis, Pseudomonas tuomuerensis, Pseudomonas tuomuerensis Xin et al. 2009, Serpens flexibilis, strain 78-123 [[Pseudomonas tuomuerensis]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.