STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO65863.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)    
Predicted Functional Partners:
argA
N-acetylglutamate synthase; Catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.752
KHO64877.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.736
KHO64507.1
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.705
KHO64398.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
 0.704
KHO65864.1
Copper resistance protein CopD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.660
KHO65861.1
Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.
   
  0.554
KHO65862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.542
KHO65860.1
Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.511
KHO65865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.472
KHO66231.1
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.443
Your Current Organism:
Pseudomonas flexibilis
NCBI taxonomy Id: 706570
Other names: ATCC 29606, JCM 14085 [[Pseudomonas tuomuerensis]], LMG 29034, LMG:29034, P. flexibilis, Pseudomonas tuomuerensis, Pseudomonas tuomuerensis Xin et al. 2009, Serpens flexibilis, strain 78-123 [[Pseudomonas tuomuerensis]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.