STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM22769.1PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain; manually curated. (654 aa)    
Predicted Functional Partners:
AFM28045.1
Mg-chelatase subunit ChlI; PFAM: von Willebrand factor type A domain; AAA domain (dynein-related subfamily).
 
 
0.973
AFM28047.1
Mg chelatase, cobalamin biosynthesis protein CobN; PFAM: CobN/Magnesium Chelatase; TIGRFAM: magnesium chelatase, H subunit; cobaltochelatase, CobN subunit.
 
 
 0.942
AFM26014.1
Mg chelatase, cobalamin biosynthesis protein CobN; PFAM: CobN/Magnesium Chelatase.
 
 
 0.939
AFM26632.1
Protoporphyrinogen oxidase; PFAM: Flavin containing amine oxidoreductase.
  
 
 0.938
AFM27446.1
PFAM: Magnesium chelatase, subunit ChlI.
 
 
0.884
AFM28046.1
PFAM: Magnesium chelatase, subunit ChlI.
 
 
0.884
AFM22984.1
TIGRFAM: geranylgeranyl reductase family.
 
  
 0.815
AFM24804.1
PFAM: Protein kinase domain.
  
 0.812
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
  
 0.714
AFM23064.1
PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
  
  
 0.667
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.