STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM23236.1Hypothetical protein. (213 aa)    
Predicted Functional Partners:
AFM23235.1
Sortase-like acyltransferase; PFAM: Acetyltransferase (GNAT) family.
     
 0.739
AFM26801.1
acyl-CoA synthetase/AMP-acid ligase; PFAM: AMP-binding enzyme.
 
  
 0.632
AFM25035.1
acyl-CoA synthetase/AMP-acid ligase; PFAM: AMP-binding enzyme.
 
  
 0.622
AFM23237.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
    0.599
AFM27932.1
PFAM: Acetyltransferase (GNAT) family; TIGRFAM: radical SAM protein, MSMEG_0568 family; putative N-acetyltransferase, MSMEG_0567 N-terminal domain family.
 
   
 0.522
AFM23234.1
Hypothetical protein.
       0.500
AFM23558.1
CBS-domain-containing membrane protein; PFAM: CBS domain.
 
    0.470
AFM23625.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Receptor family ligand binding region.
  
    0.442
AFM24657.1
CBS domain-containing protein; PFAM: CBS domain.
 
    0.440
AFM26453.1
Sortase-like acyltransferase.
 
   
 0.429
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.