STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM23382.1PFAM: Cytochrome c. (401 aa)    
Predicted Functional Partners:
AFM23380.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
 
 
 0.975
AFM23381.1
Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.974
AFM23379.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.908
AFM26319.1
Hypothetical protein.
 
 
 0.902
AFM24598.1
PFAM: Rieske [2Fe-2S] domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 
 0.852
AFM24090.1
Hypothetical protein.
 
 
 0.824
AFM24091.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
 
 
 0.747
AFM24599.1
Cytochrome b subunit of the bc complex; PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome b(C-terminal)/b6/petD.
 
 
0.725
AFM23383.1
Nitrous oxide reductase; PFAM: Cytochrome C oxidase subunit II, periplasmic domain.
 
   
 0.720
AFM23384.1
Hypothetical protein.
 
     0.622
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.