Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFM23390.1ABC-type transport system involved in multi-copper enzyme maturation, permease component. (278 aa)    
Predicted Functional Partners:
AFM23386.1
Parallel beta-helix repeat (two copies); PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies).
 
  
 0.976
AFM23389.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
  
 0.966
AFM23383.1
Nitrous oxide reductase; PFAM: Cytochrome C oxidase subunit II, periplasmic domain.
 
  
 0.964
AFM23384.1
Hypothetical protein.
 
  
 0.900
AFM23387.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.841
AFM23609.1
Nitric oxide reductase activation protein; PFAM: von Willebrand factor type A domain.
  
  
 0.811
AFM23393.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
  
 0.807
AFM25202.1
Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
  
  
 0.804
AFM23391.1
Peroxiredoxin; PFAM: AhpC/TSA family.
       0.773
AFM25229.1
Polyferredoxin; PFAM: 4Fe-4S binding domain.
  
  
 0.726
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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