STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM23397.1Hypothetical protein. (344 aa)    
Predicted Functional Partners:
AFM23395.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
     0.953
AFM23393.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
     0.949
AFM23396.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
     0.908
AFM23398.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
     0.867
AFM24956.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
     0.792
AFM27103.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
     0.792
AFM27104.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
     0.792
AFM23394.1
Hypothetical protein.
       0.773
AFM25550.1
Hypothetical protein.
  
     0.544
AFM26239.1
PFAM: Protein of unknown function (DUF721).
  
     0.540
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.