STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM23504.1Putative metal-sulfur cluster biosynthetic enzyme; PFAM: Domain of unknown function DUF59. (157 aa)    
Predicted Functional Partners:
AFM23505.1
Hypothetical protein.
       0.793
AFM23506.1
Hypothetical protein.
       0.781
AFM25655.1
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
    0.618
AFM27353.1
PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold protein NifU, Clostridium type.
  
    0.599
AFM23938.1
Iron-sulfur cluster biosynthesis protein, NifU-like protein; PFAM: NifU-like N terminal domain.
  
    0.570
AFM24676.1
Iron-sulfur cluster biosynthesis protein, NifU-like protein; PFAM: NifU-like N terminal domain.
  
    0.570
AFM24682.1
Iron-sulfur cluster biosynthesis protein, NifU-like protein; PFAM: NifU-like N terminal domain.
  
    0.570
AFM23507.1
Hypothetical protein.
       0.548
AFM23508.1
Hypothetical protein; TIGRFAM: reductive dehalogenase.
       0.512
AFM27801.1
Phosphotransacetylase; PFAM: MaoC like domain; Phosphate acetyl/butaryl transferase.
  
  
 0.484
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.