STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM23510.1Hypothetical protein; TIGRFAM: reductive dehalogenase. (351 aa)    
Predicted Functional Partners:
AFM23511.1
Hypothetical protein.
       0.773
AFM23514.1
Hypothetical protein.
  
    0.769
AFM23515.1
Hypothetical protein.
     
 0.756
AFM23513.1
Hypothetical protein.
       0.754
AFM23512.1
Hypothetical protein.
       0.752
AFM23509.1
Hypothetical protein.
       0.628
AFM23508.1
Hypothetical protein; TIGRFAM: reductive dehalogenase.
 
    
0.627
AFM23507.1
Hypothetical protein.
       0.441
AFM23152.1
Cytosine deaminase-like metal-dependent hydrolase; PFAM: Amidohydrolase family.
  
     0.421
AFM24260.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.