STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM23529.1Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; PFAM: Coenzyme A transferase. (309 aa)    
Predicted Functional Partners:
AFM23530.1
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; PFAM: Coenzyme A transferase.
 0.999
AFM23550.1
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; PFAM: Coenzyme A transferase.
 0.998
AFM23582.1
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; PFAM: Coenzyme A transferase.
 
 
0.957
AFM23549.1
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; PFAM: Coenzyme A transferase.
  
  
 
0.918
AFM23531.1
acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.702
AFM23533.1
Aromatic ring hydroxylase; PFAM: 4-hydroxyphenylacetate 3-hydroxylase N terminal; 4-hydroxyphenylacetate 3-hydroxylase C terminal.
     
 0.618
AFM23532.1
Hypothetical protein.
       0.596
AFM23534.1
Hypothetical protein.
       0.581
AFM25593.1
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein; PFAM: Carboxymuconolactone decarboxylase family.
 
  
 0.552
AFM24818.1
acetyl/propionyl-CoA carboxylase, alpha subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain.
  
  
 0.550
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.