STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM23603.1PFAM: Transcriptional regulator PadR-like family. (131 aa)    
Predicted Functional Partners:
AFM23604.1
Permease, glycerol uptake facilitator; PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.616
AFM23600.1
PFAM: Tetrahydromethanopterin S-methyltransferase MtrH subunit; TIGRFAM: N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H.
  
     0.489
AFM24801.1
PFAM: Protein of unknown function (DUF1638).
  
     0.476
AFM28176.1
Hypothetical protein; PFAM: CbiX.
 
    0.446
AFM23602.1
ATP:corrinoid adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
       0.444
AFM23605.1
Putative GTPase, G3E family; PFAM: CobW/HypB/UreG, nucleotide-binding domain.
       0.437
AFM24506.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Thi4 family.
 
     0.426
AFM27996.1
Hypothetical protein.
  
     0.425
AFM27395.1
PFAM: Protein of unknown function (DUF1638).
  
     0.414
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.