STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM23604.1Permease, glycerol uptake facilitator; PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; Belongs to the MIP/aquaporin (TC 1.A.8) family. (298 aa)    
Predicted Functional Partners:
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.903
AFM24997.1
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.867
AFM24805.1
Hypothetical protein.
    
 
 0.807
AFM24961.1
PFAM: Protein phosphatase 2C.
    
 
 0.807
AFM25749.1
PFAM: Protein phosphatase 2C.
    
 
 0.807
AFM28006.1
PFAM: Stage II sporulation protein E (SpoIIE).
    
 
 0.807
AFM25185.1
PFAM: Cyclic nucleotide-binding domain.
  
 0.705
AFM25298.1
PFAM: HEAT repeat; Cyclic nucleotide-binding domain.
  
 0.705
AFM22867.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Sigma-54 interaction domain; Cyclic nucleotide-binding domain.
   
 0.700
AFM24367.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Sigma-54 interaction domain; Cyclic nucleotide-binding domain.
   
 0.700
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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