STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM23858.1Putative P-loop-containing kinase; Displays ATPase and GTPase activities. (286 aa)    
Predicted Functional Partners:
AFM24255.1
RNAse G; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
 
 
 
 0.902
AFM25373.1
RNAse E; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
   
 
 0.888
AFM28119.1
PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
  
  
 0.859
AFM23859.1
Serine kinase of the HPr protein, regulates carbohydrate metabolism; PFAM: HPr Serine kinase C-terminal domain.
     
 0.828
AFM23857.1
Phosphotransferase system, mannose/fructose-specific component IIA; PFAM: PTS system fructose IIA component.
 
   
 0.815
AFM24578.1
PFAM: Universal stress protein family; Osmosensitive K+ channel His kinase sensor domain; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
  
  
 0.774
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
 
  
 0.670
AFM23856.1
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; PFAM: PTS system sorbose subfamily IIB component.
       0.632
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
   
 0.607
glmM-2
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
   
 0.587
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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