STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM23953.1Protein-disulfide isomerase; PFAM: DSBA-like thioredoxin domain; Vitamin K epoxide reductase family. (450 aa)    
Predicted Functional Partners:
AFM25412.1
PFAM: Protein of unknown function, DUF255; Contains selenocysteine; manually curated.
  
 
 0.711
AFM24779.1
Thiol:disulfide interchange protein; PFAM: Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255.
  
 
 0.678
AFM25943.1
Thiol:disulfide interchange protein; PFAM: Thioredoxin; Cytochrome C biogenesis protein transmembrane region.
  
 
 0.678
AFM27981.1
Thiol:disulfide interchange protein; PFAM: Cytochrome C biogenesis protein transmembrane region.
  
 
 0.678
AFM27603.1
Hypothetical protein.
     
 0.609
AFM23952.1
Hypothetical protein.
       0.603
aroB
3-dehydroquinate synthase, shikimate kinase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
   
   0.569
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.532
AFM26929.1
Copper/silver-translocating P-type ATPase; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
 
 
 
 0.528
AFM23592.1
Hypothetical protein.
  
 
 0.511
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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