STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM24542.1N-methylhydantoinase A/acetone carboxylase, beta subunit; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region. (694 aa)    
Predicted Functional Partners:
AFM24543.1
N-methylhydantoinase B/acetone carboxylase, alpha subunit; PFAM: Hydantoinase B/oxoprolinase.
 0.999
AFM24541.1
PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain.
       0.553
AFM24540.1
PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain.
       0.541
AFM24539.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
 
     0.481
AFM23673.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
 
     0.424
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.