STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM24583.1Transcriptional regulator, ArsR family. (342 aa)    
Predicted Functional Partners:
AFM26574.1
PAS domain S-box; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; PAS fold; TIGRFAM: PAS domain S-box.
  
 
 0.943
AFM24829.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
  
 
 0.826
AFM27441.1
PFAM: Response regulator receiver domain.
  
 
 0.826
AFM27972.1
Hypothetical protein.
  
 
 0.804
AFM23841.1
Hypothetical protein; PFAM: Phosphotransferase enzyme family; Zeta toxin.
   
  
 0.764
AFM23574.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
  
 
 0.730
AFM25681.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
  
 
 0.691
AFM27737.1
Putative ATPase; PFAM: Protein kinase domain; Response regulator receiver domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain.
  
 
 0.649
AFM22995.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain; GAF domain.
  
 
 0.637
AFM22904.1
Membrane carboxypeptidase (penicillin-binding protein); PFAM: Transglycosylase.
   
  
 0.623
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.