STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM24603.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
AFM24602.1
PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.773
AFM24601.1
PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region.
       0.441
AFM24604.1
Putative permease; PFAM: Sulfite exporter TauE/SafE.
       0.413
AFM24596.1
Succinate dehydrogenase, hydrophobic anchor subunit.
       0.409
AFM24597.1
Hypothetical protein.
       0.409
AFM24598.1
PFAM: Rieske [2Fe-2S] domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
       0.409
AFM24599.1
Cytochrome b subunit of the bc complex; PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome b(C-terminal)/b6/petD.
       0.409
AFM24600.1
PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region.
       0.409
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.