STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM24622.1Fe-S oxidoreductase; PFAM: Cysteine-rich domain. (383 aa)    
Predicted Functional Partners:
AFM24621.1
Tungsten-dependent benzoyl-CoA reductase subunit bamC.
 
  
 0.840
AFM24623.1
Polyferredoxin, heterodixulfide reductase subunit A; PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain; Contains selenocysteine; manually curated.
 
   
 0.776
AFM24620.1
PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3.
 
 
   0.758
AFM27938.1
PFAM: Nitrate reductase gamma subunit.
 
 
 0.705
AFM25300.1
Hypothetical protein; PFAM: Uncharacterised ACR, YkgG family COG1556.
  
 
 0.621
AFM22903.1
Hypothetical protein; PFAM: Uncharacterised ACR, YkgG family COG1556.
  
 
 0.609
AFM25011.1
(4Fe-4S) cluster-containing protein; PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein.
  
 
 0.609
AFM24309.1
Hypothetical protein.
 
  
 0.591
AFM23514.1
Hypothetical protein.
  
 
 0.588
AFM24624.1
Coenzyme F420-reducing hydrogenase, delta subunit; PFAM: Bacterial regulatory protein, arsR family; Methyl-viologen-reducing hydrogenase, delta subunit; Contains selenocysteine; manually curated.
 
   
 0.576
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.