STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM24834.1Arylsulfatase A family protein; PFAM: Sulfatase. (528 aa)    
Predicted Functional Partners:
AFM27667.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
   
 0.740
AFM25188.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
   
 0.718
AFM23201.1
Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme.
 
   0.700
AFM25186.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
   
 0.698
AFM24222.1
Polyketide synthase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; 4'-phosphopantetheinyl transferase superfamily; 2-nitropropane dioxygenase; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: phosphopantetheine--protein transferase domain.
  
 
 0.690
AFM27726.1
PFAM: Radical SAM superfamily; TIGRFAM: His-Xaa-Ser system radical SAM maturase HsxB.
 
 
 0.687
AFM26592.1
Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme.
 
   0.679
AFM24248.1
Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme.
 
   0.675
AFM24833.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin.
  
  
 0.654
AFM24832.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
     0.643
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.