STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM24845.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
AFM24844.1
Hypothetical protein.
       0.789
AFM26591.1
PFAM: Eco57I restriction endonuclease; TIGRFAM: type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family.
 
  
 0.675
AFM23340.1
Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase.
  
  
 0.610
AFM26298.1
Hypothetical protein.
   
    0.537
AFM26302.1
Hypothetical protein.
   
    0.537
AFM24469.1
PFAM: Predicted permease; Contains selenocysteine; manually curated.
  
    0.505
AFM26166.1
PFAM: Predicted permease.
  
    0.505
AFM27984.1
PFAM: Predicted permease.
  
    0.505
AFM27798.1
Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix.
   
    0.420
AFM23075.1
Putative ATPase.
 
     0.412
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.