STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM24910.1Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: ubiE/COQ5 methyltransferase family. (255 aa)    
Predicted Functional Partners:
AFM24909.1
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; PFAM: Protein of unknown function (DUF3419).
  
 0.999
AFM24912.1
Hypothetical protein.
 
     0.805
AFM23254.1
Sulfotransferase family protein; PFAM: Sulfotransferase domain.
 
     0.598
AFM24222.1
Polyketide synthase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; 4'-phosphopantetheinyl transferase superfamily; 2-nitropropane dioxygenase; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: phosphopantetheine--protein transferase domain.
   
 
 0.560
AFM23605.1
Putative GTPase, G3E family; PFAM: CobW/HypB/UreG, nucleotide-binding domain.
 
   
 0.517
AFM24908.1
Hypothetical protein.
 
     0.487
AFM25204.1
ATPase family protein associated with various cellular activities (AAA); PFAM: AAA domain (dynein-related subfamily).
 
     0.477
AFM24911.1
TIGRFAM: conserved hypothetical protein.
       0.466
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.453
AFM27758.1
Iron-only hydrogenase maturation rSAM protein HydE; PFAM: Radical SAM superfamily; TIGRFAM: [FeFe] hydrogenase H-cluster radical SAM maturase HydE.
  
  
 0.453
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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