STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM24939.1Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport. (447 aa)    
Predicted Functional Partners:
AFM26146.1
Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
 
  
 0.749
AFM23702.1
Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
 
  
 0.638
AFM23179.1
Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
 
  
 0.581
AFM24222.1
Polyketide synthase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; 4'-phosphopantetheinyl transferase superfamily; 2-nitropropane dioxygenase; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: phosphopantetheine--protein transferase domain.
  
  
 0.545
AFM23703.1
Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
 
  
 0.506
AFM23180.1
Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
 
  
 0.501
AFM24925.1
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
   
 0.489
AFM27019.1
Anion transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter.
  
  
 0.482
AFM24940.1
PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase.
     
 0.479
AFM24938.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
       0.450
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.