STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM24961.1PFAM: Protein phosphatase 2C. (237 aa)    
Predicted Functional Partners:
AFM24335.1
WD40 repeat-containing protein; PFAM: Protein kinase domain; WD domain, G-beta repeat.
 
 0.931
AFM27365.1
PFAM: Protein kinase domain; WD domain, G-beta repeat.
 
 
 0.910
AFM26783.1
Ribosomal RNA small subunit methyltransferase RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.902
AFM26541.1
PFAM: Protein kinase domain; Cyclic nucleotide-binding domain.
 
 0.901
AFM24962.1
PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme.
 
 0.894
AFM26496.1
PFAM: Protein kinase domain; Cyclic nucleotide-binding domain.
 
 0.892
AFM22827.1
PFAM: Protein kinase domain.
 
 
 0.875
AFM23046.1
PFAM: Protein kinase domain; Cyclic nucleotide-binding domain.
 
 0.875
AFM25228.1
PFAM: Protein kinase domain.
 
 0.874
AFM27156.1
PFAM: Protein kinase domain; PilZ domain.
 
 0.874
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.