STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM24970.1Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family. (319 aa)    
Predicted Functional Partners:
AFM27393.1
PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
 
  
 0.598
AFM27011.1
PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
 
  
 0.542
AFM23198.1
DNA-binding domain-containing protein, AraC-type.
  
  
 0.530
AFM27798.1
Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix.
  
    0.502
AFM22999.1
DNA-binding domain-containing protein, AraC-type.
  
  
 0.499
AFM23134.1
NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family.
  
    0.491
AFM24377.1
NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family.
  
    0.491
AFM24515.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
 
  
 0.472
AFM24971.1
Dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit; PFAM: 4Fe-4S binding domain.
       0.458
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.