STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM25064.1CO dehydrogenase maturation factor; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (255 aa)    
Predicted Functional Partners:
AFM22977.1
PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit.
 
  
 0.952
AFM22978.1
PFAM: Prismane/CO dehydrogenase family; CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit.
 
  
 0.926
AFM25065.1
Hypothetical protein.
 
     0.900
AFM27767.1
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit.
 
  
 0.888
AFM22976.1
PFAM: Putative Fe-S cluster; CO dehydrogenase/acetyl-CoA synthase delta subunit.
 
  
 0.866
AFM24740.1
PFAM: Putative Fe-S cluster; CO dehydrogenase/acetyl-CoA synthase delta subunit.
 
  
 0.866
AFM24178.1
CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein); PFAM: Putative Fe-S cluster.
 
  
 0.794
AFM26540.1
Hypothetical protein; PFAM: Putative Fe-S cluster.
  
     0.770
AFM27114.1
Hypothetical protein.
  
     0.757
AFM27527.1
PFAM: Methylene-tetrahydrofolate reductase C terminal.
 
   
 0.755
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.