STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM25095.1PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase. (532 aa)    
Predicted Functional Partners:
AFM25094.1
Ankyrin repeat-containing protein.
       0.727
AFM26407.1
PAP2 (acid phosphatase) superfamily protein; PFAM: PAP2 superfamily.
 
   
 0.667
AFM25096.1
PFAM: Transcriptional regulator PadR-like family.
       0.530
AFM27473.1
PFAM: Glycosyl transferase family 2.
  
 0.494
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
  
 0.491
AFM25097.1
Multimeric flavodoxin WrbA; PFAM: NADPH-dependent FMN reductase; SCP-2 sterol transfer family.
  
    0.481
AFM22773.1
methionyl-tRNA formyltransferase; PFAM: Formyl transferase.
 
  
 0.476
AFM23640.1
methionyl-tRNA formyltransferase; PFAM: Formyl transferase.
  
  
 0.403
AFM25486.1
methionyl-tRNA formyltransferase; PFAM: Formyl transferase.
  
  
 0.403
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.