STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM25119.1PFAM: Bacterial transcriptional activator domain; Tetratricopeptide repeat. (737 aa)    
Predicted Functional Partners:
AFM26667.1
Tetratricopeptide repeat protein.
 
 
 0.789
AFM25648.1
Hypothetical protein.
 
 
 0.775
AFM25459.1
Putative N-acetylglucosaminyl transferase; PFAM: Tetratricopeptide repeat.
 
 
 0.769
AFM27510.1
PFAM: Tetratricopeptide repeat.
 
 
 0.764
AFM25803.1
PFAM: Tetratricopeptide repeat.
 
 
 0.749
AFM24153.1
TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; SEC-C motif.
 
 
 0.747
AFM23055.1
PFAM: Tetratricopeptide repeat.
 
 
 0.737
AFM24692.1
Tfp pilus assembly protein PilF; PFAM: Tetratricopeptide repeat.
 
     0.735
AFM27634.1
Cytochrome c biogenesis factor; PFAM: Tetratricopeptide repeat.
 
 
   0.732
AFM26668.1
PFAM: Tetratricopeptide repeat.
 
 
 0.730
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.