STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM25176.1PFAM: Mechanosensitive ion channel. (584 aa)    
Predicted Functional Partners:
AFM25177.1
Hypothetical protein.
       0.773
AFM25179.1
PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family.
  
    0.675
AFM25175.1
TIGRFAM: conserved hypothetical protein.
       0.563
AFM25142.1
PFAM: Mechanosensitive ion channel.
 
  
0.526
AFM25178.1
PFAM: Protein of unknown function (DUF1254); Protein of unknown function (DUF1214).
 
     0.490
AFM27737.1
Putative ATPase; PFAM: Protein kinase domain; Response regulator receiver domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain.
     
 0.456
AFM25174.1
Hypothetical protein.
       0.424
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.