STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM25188.1Arylsulfatase A family protein; PFAM: Sulfatase. (571 aa)    
Predicted Functional Partners:
AFM25187.1
Phosphoserine phosphatase.
 
   
 0.900
AFM25189.1
Tfp pilus assembly protein PilF; PFAM: Tetratricopeptide repeat.
 
     0.872
AFM25178.1
PFAM: Protein of unknown function (DUF1254); Protein of unknown function (DUF1214).
 
     0.801
AFM24414.1
PFAM: Protein of unknown function (DUF1254); Protein of unknown function (DUF1214).
 
     0.786
AFM26214.1
PFAM: Protein of unknown function (DUF1254); Protein of unknown function (DUF1214).
 
     0.783
AFM23201.1
Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme.
 
   0.773
AFM24248.1
Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme.
 
   0.766
AFM26592.1
Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme.
 
   0.747
AFM24834.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
   
 0.718
AFM27217.1
Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain.
 
   
 0.709
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.