STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM25204.1ATPase family protein associated with various cellular activities (AAA); PFAM: AAA domain (dynein-related subfamily). (280 aa)    
Predicted Functional Partners:
AFM25203.1
Hypothetical protein.
 
     0.950
AFM23609.1
Nitric oxide reductase activation protein; PFAM: von Willebrand factor type A domain.
 
  
 0.767
AFM25202.1
Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
  
  
 0.640
AFM23011.1
4-aminobutyrate aminotransferase family protein; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.610
AFM25229.1
Polyferredoxin; PFAM: 4Fe-4S binding domain.
  
  
 0.559
AFM23383.1
Nitrous oxide reductase; PFAM: Cytochrome C oxidase subunit II, periplasmic domain.
   
  
 0.550
AFM23386.1
Parallel beta-helix repeat (two copies); PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies).
  
    0.519
AFM26825.1
PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
  
    0.504
AFM25324.1
PFAM: Protein of unknown function DUF58.
 
  
 0.501
AFM26249.1
Transcriptional regulator.
  
  
 0.487
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.