STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM25230.1Hypothetical protein; PFAM: Domain of unknown function (DUF362). (311 aa)    
Predicted Functional Partners:
AFM25229.1
Polyferredoxin; PFAM: 4Fe-4S binding domain.
 
     0.955
AFM24122.1
NADH:ubiquinone oxidoreductase chain I-like protein; PFAM: 4Fe-4S binding domain.
 
     0.716
AFM26764.1
Hypothetical protein; PFAM: 4Fe-4S binding domain.
 
     0.607
AFM27661.1
PFAM: Aldo/keto reductase family.
 
     0.592
AFM24524.1
PFAM: Nitroreductase family.
  
     0.578
AFM25228.1
PFAM: Protein kinase domain.
       0.503
AFM25231.1
Hypothetical protein; PFAM: LemA family.
       0.485
AFM25542.1
Hypothetical protein; PFAM: Domain of unknown function (DUF362).
  
     0.458
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.