STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM25397.1ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (238 aa)    
Predicted Functional Partners:
AFM23955.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.967
AFM26188.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.966
AFM26189.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.966
AFM28056.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.966
AFM28088.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.966
AFM28089.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.966
AFM23193.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.965
AFM23194.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.965
AFM25396.1
TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.963
AFM25219.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
 0.961
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.