STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM25615.1PFAM: Methylene-tetrahydrofolate reductase C terminal. (222 aa)    
Predicted Functional Partners:
AFM25616.1
PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.956
rnfD
Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
  
 
 0.836
AFM28166.1
PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.817
AFM25573.1
Putative NADH:ubiquinone oxidoreductase, subunit RnfG; PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit.
  
 
 0.816
AFM22978.1
PFAM: Prismane/CO dehydrogenase family; CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit.
 
   
 0.814
AFM27526.1
PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.813
AFM24626.1
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain.
  
 
 0.807
AFM22977.1
PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit.
 
   
 0.805
AFM25574.1
Putative NADH:ubiquinone oxidoreductase, subunit RnfE; PFAM: Rnf-Nqr subunit, membrane protein; Belongs to the NqrDE/RnfAE family.
  
 
 0.793
AFM27767.1
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit.
 
   
 0.787
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.