STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM25786.1General secretory pathway protein E/type IV-A pilus assembly ATPase PilB; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (564 aa)    
Predicted Functional Partners:
AFM25784.1
Type II secretory pathway, component PulF; PFAM: Bacterial type II secretion system protein F domain.
 
 0.993
AFM27461.1
Type 4 prepilin peptidase 1; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.910
AFM27883.1
PFAM: Fimbrial assembly protein (PilN).
  
 
 0.896
AFM27882.1
PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM.
 
 
 0.877
AFM25807.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
 
 0.866
AFM26380.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
 
 0.866
AFM27457.1
PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.761
AFM23807.1
Type II secretory pathway, component HofQ; PFAM: Localisation of periplasmic protein complexes; Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.737
AFM25785.1
PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT.
 
  
0.714
AFM27884.1
PFAM: Pilus assembly protein, PilO.
  
 
 0.703
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.