STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM25831.1Metal-dependent hydrolase, beta-lactamase superfamily III. (281 aa)    
Predicted Functional Partners:
AFM28109.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain.
 
 
 
 0.749
AFM24106.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; GAF domain; FHA domain.
 
   
 0.731
AFM26961.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain; Cache domain.
 
   
 0.716
AFM26067.1
PFAM: Adenylate and Guanylate cyclase catalytic domain.
 
   
 0.715
AFM24343.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain.
 
   
 0.707
AFM27102.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain.
 
   
 0.702
AFM23102.1
PFAM: Adenylate and Guanylate cyclase catalytic domain.
 
   
 0.696
AFM26736.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain; Cache domain.
 
   
 0.692
AFM27470.1
Adenylate/guanylate cyclase family protein; PFAM: Adenylate and Guanylate cyclase catalytic domain.
 
   
 0.575
AFM25833.1
MoxR-like ATPase; PFAM: AAA domain (dynein-related subfamily).
 
     0.539
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.