STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM26188.1ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease. (397 aa)    
Predicted Functional Partners:
AFM23109.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.990
AFM28038.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.990
AFM23195.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.989
AFM28087.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.989
AFM27303.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.988
AFM27109.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.973
AFM25397.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.966
lolD
ABC-type antimicrobial peptide transport system, ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 
 0.962
AFM23257.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.960
AFM23396.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.960
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.