STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM26452.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
AFM26453.1
Sortase-like acyltransferase.
 
   
 0.847
AFM26801.1
acyl-CoA synthetase/AMP-acid ligase; PFAM: AMP-binding enzyme.
 
  
 0.640
AFM25035.1
acyl-CoA synthetase/AMP-acid ligase; PFAM: AMP-binding enzyme.
 
  
 0.633
AFM26451.1
PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric.
       0.576
AFM26454.1
Hypothetical protein.
       0.493
AFM23558.1
CBS-domain-containing membrane protein; PFAM: CBS domain.
 
    0.464
AFM27932.1
PFAM: Acetyltransferase (GNAT) family; TIGRFAM: radical SAM protein, MSMEG_0568 family; putative N-acetyltransferase, MSMEG_0567 N-terminal domain family.
     
 0.449
AFM24657.1
CBS domain-containing protein; PFAM: CBS domain.
 
    0.425
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.